PUBLICATIONS

I indicate my contributions to each manuscript following the CRediT Authorship Role Taxonomy as per Brand A., Allen L., Altman M., Hlava M., Scott J. (2015). Beyond authorship: Attribution, contribution, collaboration, and credit. Learned Publishing, 28 (2) :151-155. See here for a list of definitions.




PEER-REVIEWED PUBLICATIONS

2019

15. Baker P. A., Fritz S. C., Dick C. W., Battisti D. S., Vargas O. M., Asner G. P., Martin R. E., Wheatley A., Prates I. (in press). Beyond Refugia: New insights on Quaternary climate variation and the evolution of biotic diversity in tropical South America. In: Rull V., Carnaval A. C. (Eds.), Neotropical Diversification. Springer, Berlin. # peer-reviewed book chapter
# IP: Conceptualization, investigation, resources, visualization, writing (original draft).

2018

14. Prates I., Penna A., Rodrigues M. T., Carnaval A. C. (2018). Local adaptation in mainland anole lizards: Integrating population history and genome-environment associations. Ecology and Evolution, 8 (23): 11932-11944. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, software, formal analysis, visualization, data curation, writing (original draft).

13. Dal-Vechio F., Prates I., Grazziotin F. G., Zaher H., Rodrigues M. T. (2018). Phylogeography and historical demography of the arboreal pit viper Bothrops bilineatus (Serpentes, Crotalinae) reveal multiple connections between Amazonian and Atlantic rainforests. Journal of Biogeography, 45: 2415–2426. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, writing (original draft), supervision.

12. Marques-Souza S., Prates I., Fouquet A., Camacho A., Kok P. J.R. , Nunes P. M. S., Dal-Vechio F., Recoder R. R., Mejia N., Teixeira Jr. M., Barrio-Aimorós C., Cassimiro J., Lima J. D., Sena M. A., Rodrigues M. T. (2018). Reconquering the water: evolution and systematics of South and Central American Cercosaurini aquatic lizards (Squamata: Gymnophthalmidae). Zoologica Scripta, 47 (3): 255-265. PDF
# IP: Funding acquisition, resources, writing (original draft).

11. Melo-Sampaio P. R., Oliveira R. M., Prates I. (2018). A new nurse frog from Brazil  (Aromobatidae: Allobates), with data on the distribution and phenotypic variation of western Amazonian species. South American Journal of Herpetology, 13(2): 131-149. PDF  
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, visualization, data curation, writing (original draft), supervision, project administration.

2017

10. Prates I., Melo-Sampaio P. R., Drummond L. O., Teixeira-Jr. M., Rodrigues M. T., Carnaval A. C. (2017). Biogeographic links between southern Atlantic Forest and western South America: rediscovery, redescription, and phylogenetic relationships of two rare montane anole lizards from Brazil. Molecular Phylogenetics and Evolution, 113: 49-58. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, visualization, data curation, writing (original draft).

2016

09. Prates I., Xue A. T., Brown J. L., Alvarado-Serrano D. F., Rodrigues M. T., Hickerson M. J., Carnaval A. C. (2016). Inferring responses to climate dynamics from historical demography in neotropical forest lizards. Proceedings of the National Academy of Sciences, 113(29): 7978-7985. PDF

# IP: Conceptualization, funding acquisition, resources, methodology, investigation, software, formal analysis, visualization, data curation, writing (original draft), supervision, project administration.

08. Prates I., Rivera D., Rodrigues M. T., Carnaval, A. C. (2016). A mid‐Pleistocene rainforest corridor enabled synchronous invasions of the Atlantic Forest by Amazonian anole lizards. Molecular Ecology, 25: 5174–5186. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, visualization, data curation, writing (original draft).

07. Prates I., Hernandez L., Samelo R. R., Carnaval, A. C. (2016). Molecular identification and geographic origin of an exotic anole lizard introduced to Brazil, with remarks on its natural history. South American Journal of Herpetology,
11(3): 220-227. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, visualization, data curation, writing (original draft), supervision.

06. Teixeira-Jr. M., Prates I., Nisa C., Silva-Martins N. S. C., Strüssmann C., Rodrigues M. T. (2016). Molecular data reveal spatial and temporal patterns of diversification and a cryptic new species of lowland Stenocercus Duméril & Bibron, 1837 (Squamata: Tropiduridae). Molecular Phylogenetics and Evolution, 94: 410-423. PDF
# IP: Conceptualization, methodology, software, formal analysis, data curation, writing (original draft).

2015

05. Prates I., Rodrigues M. T., Melo-Sampaio P. R., Carnaval A. C. (2015). Phylogenetic relationships of Amazonian anole lizards (Dactyloa): taxonomic implications, new insights about phenotypic evolution and the timing of diversification. Molecular Phylogenetics and Evolution, 82: 258-268. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, visualization, data curation, writing (original draft).

2014

04. Carnaval A. C., Waltari E., Rodrigues M. T., Rosauer D., Van Der Wal J., Damasceno R., Prates I., Strangas M., Spanos Z., Rivera D., Pie M. R., Firkowski C. R., Bornschein M. R., Ribeiro L. F., Moritz C. (2014). Prediction of phylogeographic endemism in an environmentally complex biome. Proceedings of the Royal Society of London B: Biological Sciences, 281: 20141461. PDF
# IP: Resources, investigation, visualization, data curation, writing (review & editing).

Undergraduate and Masters research

03. Prates I., Angilleta Jr M. J., Wilson R. S., Niehaus A. C., Navas C. A. (2013). Dehydration hardly slows hopping toads (Rhinella granulosa) from xeric and mesic environments. Physiological and Biochemical Zoology, 86(4): 451-457. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, visualization, writing (original draft).

02. Prates I., Antoniazzi M. M., Sciani J. M., Pimenta D. C., Toledo L. F., Haddad C. F. B., Jared C. (2012). Skin glands, poison, and mimicry in dendrobatid and leptodactylid amphibians. Journal of Morphology, 273(3): 279-290. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, visualization, writing (original draft).

01. Prates I., Navas C. A. (2009). Cutaneous resistance to evaporative water loss in Brazilian Rhinella (Anura: Bufonidae) from contrasting environments. Copeia, 2009(3): 618-622. PDF
# IP: Conceptualization, funding acquisition, resources, methodology, investigation, formal analysis, visualization, writing (original draft).




UNDER REVIEW AND PREPRINTS

Prates I., Paz A., Brown J. L., Carnaval A. (2019). Effects of prey turnover on poison frog toxins: using landscape ecology to assess how biotic interactions affect species phenotypes. bioRxiv, available here .
# IP: Conceptualization, resources, methodology, investigation, formal analysis, visualization, data curation, writing (original draft), supervision.


Recoder R., Prates I., Marques-Souza S., Camacho A., Nunes P. M. S., Dal-Vechio F., Ghellere J. M., McDiarmid R. W., Rodrigues M. T. (2019). Lizards from the Lost World: Discovery of two new species and evolutionary relationships of the Pantepui highland Riolama (Gymnophthalmidae). Zoological Journal of the Linnean Society, under review.
# IP: Conceptualization, resources, methodology, investigation, formal analysis, writing (original draft), supervision.

Prates I., Melo-Sampaio P. R., de Queiroz K., Carnaval A. C., Rodrigues M. T., Drummond L. O. (2019). Discovery of a new species of Anolis lizards from Brazil and its implications for the historical biogeography of montane Atlantic Forest endemics. Amphibia-Reptilia, under review.
# IP: Conceptualization, resources, methodology, investigation, formal analysis, visualization, data curation, writing (original draft).

Dal-Vechio F., Prates I., Grazziotin F. G., Zaher H., Grabosky R., Rodrigues M. T. (2019). Rainforest shifts through time and riverine barriers shaped the diversification of South American terrestrial pit vipers (Bothrops jararacussu species group). Journal of Biogeography, under review.
# IP: Conceptualization, resources, methodology, investigation, formal analysis, writing (original draft), supervision.

Rivera D., Prates I., Rodrigues M. T., Carnaval A. C. (2018). Effects of climate and geography on spatial patterns of phylogenetic structure in tropical skinks. Molecular Phylogenetics and Evolution, under review.
# IP: Conceptualization, writing (original draft).




NON PEER-REVIEWED

06. Prates I. (2019). Using mainland anole genomes to understand habitat shifts through time. In: Stroud J.T., Geneva A.J., Losos J.B. (Eds.), Anolis Newsletter VII, pp. 220-223. Washington University, St. Louis.

05. Oliveira J.C.F., Castro T.M., Vrcibradic D., Drago M.C., Prates I. (2018). A second Caribbean anole lizard species introduced to Brazil. Herpetology Notes, 11: 761-764. PDF

04. Prates I. (2008). Adaptação fisiológica de anfíbios em ambientes com baixa disponibilidade hídrica [Physiological adaptations of amphibians to environments with low water availability]. Textbook of the V Winter Course: Topics in Comparative Physiology, pp. 310-316. USP, São Paulo.

03. Prates I. (2007). A vida no limite: Adaptações bioquímicas a extremos de temperatura [Life on the edge: Biochemical adaptation to temperature extremes]. Textbook of the IV Winter Course: Topics in Comparative Physiology, pp. 49-53. USP, São Paulo.

02. Prates I., Moreira L.S.D. (2007). Invertebrados [Invertebrates]. In: Trajano, E. (Ed.), Sistema Areias: 100 Anos de Estudos [Areias Cave System: 100 Years of Study], pp. 72-84. Redespeleo Brasil, São Paulo.


01. Moreira L.S.D., Prates I., Trajano, E. (2007). Biologia [Biology]. In: Trajano, E. (Ed.), Sistema Areias: 100 Anos de Estudos [Areias Cave System: 100 Years of Study], pp. 45-54. Redespeleo Brasil, São Paulo.



Ivan Prates
ivanprates [at] gmail [dot] com
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